https://humphreyaddy.github.io/website/blog.html Notes on genomics, microbial ecology, and data-driven biology. en 2026-05-01T20:49:51+00:00 https://humphreyaddy.github.io/website/posts/microbiome-visualisation-in-r.html https://humphreyaddy.github.io/website/posts/microbiome-visualisation-in-r.html Sun, 10 Aug 2025 00:00:00 +0000 Practical recipes for plotting microbiome data in R — stacked bars that don't lie, ordinations that read at a glance, and tidy taxa wrangling. https://humphreyaddy.github.io/website/posts/importance-of-file-naming.html https://humphreyaddy.github.io/website/posts/importance-of-file-naming.html Tue, 29 Jul 2025 00:00:00 +0000 File-naming conventions are critical for reproducibility and pipeline stability. Here's how I automated naming checks across a lab's shared drives.